Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 AC092127.1-201ENST00000567093 3455 ntBASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 AC126915.1-201ENST00000522847 1038 ntBASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 RN7SL713P-201ENST00000582127 302 ntBASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 AC073413.1-201ENST00000603927 732 ntBASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNMT3BQ9UBC3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 AL391280.1-201ENST00000506969 1062 ntBASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 RNA5SP423-201ENST00000517127 109 ntBASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 AC105917.1-201ENST00000506637 2539 ntBASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNMT3BQ9UBC3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DNMT3BQ9UBC3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DNMT3BQ9UBC3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.93■□□□□ 0.14
DNMT3BQ9UBC3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
DNMT3BQ9UBC3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNMT3BQ9UBC3 KRT8P4-201ENST00000509735 1454 ntBASIC15.93■□□□□ 0.14
DNMT3BQ9UBC3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.93■□□□□ 0.14
DNMT3BQ9UBC3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNMT3BQ9UBC3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DNMT3BQ9UBC3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms