Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 CYMP-203ENST00000474680 1263 ntBASIC12.77□□□□□ -0.37
CALYQ9NYX4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 AC011467.4-201ENST00000594891 528 ntBASIC12.77□□□□□ -0.37
CALYQ9NYX4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.77□□□□□ -0.37
CALYQ9NYX4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.77□□□□□ -0.37
CALYQ9NYX4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 AC036164.1-201ENST00000570544 333 ntBASIC12.76□□□□□ -0.37
CALYQ9NYX4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.76□□□□□ -0.37
CALYQ9NYX4 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.76□□□□□ -0.37
CALYQ9NYX4 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.76□□□□□ -0.37
CALYQ9NYX4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.76□□□□□ -0.37
CALYQ9NYX4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.76□□□□□ -0.37
CALYQ9NYX4 AC023824.1-201ENST00000562945 2975 ntBASIC12.76□□□□□ -0.37
CALYQ9NYX4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CALYQ9NYX4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.76□□□□□ -0.37
CALYQ9NYX4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms