Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 KRT18P64-201ENST00000434946 1219 ntBASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 AC138969.3-201ENST00000546612 1459 ntBASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 AC138932.2-201ENST00000548268 1459 ntBASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 AC126755.4-201ENST00000549796 1459 ntBASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 AL121723.1-201ENST00000445194 1519 ntBASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 AC087499.5-201ENST00000452760 1342 ntBASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NEUROD4Q9HD90 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 DUX4L27-201ENST00000554796 1261 ntBASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 LINC01115-203ENST00000606068 577 ntBASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.59□□□□□ -0.07
NEUROD4Q9HD90 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NEUROD4Q9HD90 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NEUROD4Q9HD90 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
NEUROD4Q9HD90 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
NEUROD4Q9HD90 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.58□□□□□ -0.07
NEUROD4Q9HD90 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NEUROD4Q9HD90 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NEUROD4Q9HD90 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.58□□□□□ -0.07
NEUROD4Q9HD90 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NEUROD4Q9HD90 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.58□□□□□ -0.08
NEUROD4Q9HD90 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NEUROD4Q9HD90 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.58□□□□□ -0.08
NEUROD4Q9HD90 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NEUROD4Q9HD90 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NEUROD4Q9HD90 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NEUROD4Q9HD90 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.58□□□□□ -0.08
NEUROD4Q9HD90 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms