Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 SDHAP3-202ENST00000515467 728 ntBASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 IGHV3-42-201ENST00000520410 361 ntBASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 AC051619.7-201ENST00000568314 623 ntBASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 AC074044.1-201ENST00000609673 707 ntBASIC15.52■□□□□ 0.08
CCDC68Q9H2F9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC68Q9H2F9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 AC126335.2-201ENST00000623362 4637 ntBASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 METTL21AP1-201ENST00000438852 635 ntBASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 AL512361.1-201ENST00000554200 418 ntBASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 AL158211.3-201ENST00000607385 239 ntBASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 AC023024.2-201ENST00000623561 1993 ntBASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms