Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 BX276092.5-203ENST00000456199 560 ntBASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AL671277.2-201ENST00000458060 996 ntBASIC12.54□□□□□ -0.4
NKX6-2Q9C056 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 NTF6B-201ENST00000591913 560 ntBASIC12.54□□□□□ -0.4
NKX6-2Q9C056 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AL121672.3-201ENST00000608644 468 ntBASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AC114341.1-201ENST00000618070 349 ntBASIC12.54□□□□□ -0.4
NKX6-2Q9C056 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AC015802.1-201ENST00000588104 1449 ntBASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AC073508.3-201ENST00000619697 1419 ntBASIC12.54□□□□□ -0.4
NKX6-2Q9C056 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 AC073548.1-201ENST00000624088 1882 ntBASIC12.53□□□□□ -0.4
NKX6-2Q9C056 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 BNIP3P1-202ENST00000550043 1585 ntBASIC12.53□□□□□ -0.4
NKX6-2Q9C056 DNM1P41-201ENST00000623634 3350 ntBASIC12.53□□□□□ -0.4
NKX6-2Q9C056 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 AC005412.3-201ENST00000580309 715 ntBASIC12.53□□□□□ -0.4
NKX6-2Q9C056 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 AC233702.3-201ENST00000578656 1387 ntBASIC12.53□□□□□ -0.4
NKX6-2Q9C056 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX6-2Q9C056 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.52□□□□□ -0.4
NKX6-2Q9C056 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.52□□□□□ -0.4
NKX6-2Q9C056 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms