Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.04□□□□□ -0.48
TRGV9Q99603 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.04□□□□□ -0.48
TRGV9Q99603 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRGV9Q99603 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
TRGV9Q99603 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
TRGV9Q99603 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.03□□□□□ -0.48
TRGV9Q99603 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.03□□□□□ -0.48
TRGV9Q99603 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 KRT18P43-201ENST00000469825 1281 ntBASIC12.03□□□□□ -0.48
TRGV9Q99603 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 AC025048.3-201ENST00000590609 569 ntBASIC12.03□□□□□ -0.48
TRGV9Q99603 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 MIR6080-201ENST00000617359 66 ntBASIC12.03□□□□□ -0.48
TRGV9Q99603 AC005702.4-201ENST00000618393 416 ntBASIC12.03□□□□□ -0.48
TRGV9Q99603 AC009093.7-201ENST00000623853 1223 ntBASIC12.03□□□□□ -0.48
TRGV9Q99603 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.03□□□□□ -0.48
TRGV9Q99603 LINC00628-201ENST00000628516 1289 ntBASIC12.03□□□□□ -0.48
TRGV9Q99603 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 AL033527.5-202ENST00000641632 1098 ntBASIC12.03□□□□□ -0.48
TRGV9Q99603 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 AC007787.1-201ENST00000588095 1583 ntBASIC12.03□□□□□ -0.48
TRGV9Q99603 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRGV9Q99603 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV9Q99603 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
TRGV9Q99603 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV9Q99603 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.02□□□□□ -0.48
TRGV9Q99603 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
TRGV9Q99603 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.02□□□□□ -0.48
TRGV9Q99603 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.02□□□□□ -0.48
TRGV9Q99603 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV9Q99603 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
TRGV9Q99603 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.02□□□□□ -0.49
TRGV9Q99603 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV9Q99603 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV9Q99603 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV9Q99603 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.02□□□□□ -0.49
TRGV9Q99603 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms