Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 MROH4P-201ENST00000431302 1578 ntBASIC14.25□□□□□ -0.13
CNOT9Q92600 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CNOT9Q92600 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CNOT9Q92600 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CNOT9Q92600 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.24□□□□□ -0.13
CNOT9Q92600 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CNOT9Q92600 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CNOT9Q92600 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.24□□□□□ -0.13
CNOT9Q92600 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CNOT9Q92600 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CNOT9Q92600 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.24□□□□□ -0.13
CNOT9Q92600 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.24□□□□□ -0.13
CNOT9Q92600 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.24□□□□□ -0.13
CNOT9Q92600 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.24□□□□□ -0.13
CNOT9Q92600 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.24□□□□□ -0.13
CNOT9Q92600 AC008738.7-201ENST00000609744 511 ntBASIC14.24□□□□□ -0.13
CNOT9Q92600 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.24□□□□□ -0.13
CNOT9Q92600 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.24□□□□□ -0.13
CNOT9Q92600 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CNOT9Q92600 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CNOT9Q92600 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.24□□□□□ -0.13
CNOT9Q92600 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CNOT9Q92600 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.24□□□□□ -0.13
CNOT9Q92600 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CNOT9Q92600 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.24□□□□□ -0.13
CNOT9Q92600 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CNOT9Q92600 OR2I1P-210ENST00000642037 4691 ntBASIC14.24□□□□□ -0.13
CNOT9Q92600 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.24□□□□□ -0.13
CNOT9Q92600 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT9Q92600 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CNOT9Q92600 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT9Q92600 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.23□□□□□ -0.13
CNOT9Q92600 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT9Q92600 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.23□□□□□ -0.13
CNOT9Q92600 SBF1P1-201ENST00000444527 5631 ntBASIC14.23□□□□□ -0.13
CNOT9Q92600 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.23□□□□□ -0.13
CNOT9Q92600 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT9Q92600 FAM8A3P-201ENST00000427218 844 ntBASIC14.23□□□□□ -0.13
CNOT9Q92600 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.23□□□□□ -0.13
CNOT9Q92600 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT9Q92600 AL589987.1-201ENST00000453380 819 ntBASIC14.23□□□□□ -0.13
CNOT9Q92600 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT9Q92600 AC004890.2-204ENST00000481968 304 ntBASIC14.23□□□□□ -0.13
CNOT9Q92600 SPDYE18-201ENST00000510091 1050 ntBASIC14.23□□□□□ -0.13
CNOT9Q92600 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.23□□□□□ -0.13
CNOT9Q92600 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CNOT9Q92600 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.23□□□□□ -0.13
CNOT9Q92600 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT9Q92600 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CNOT9Q92600 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
CNOT9Q92600 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.23□□□□□ -0.13
CNOT9Q92600 AC092337.1-201ENST00000568699 1129 ntBASIC14.23□□□□□ -0.13
CNOT9Q92600 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.23□□□□□ -0.13
CNOT9Q92600 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
CNOT9Q92600 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT9Q92600 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CNOT9Q92600 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT9Q92600 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms