Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 AC026803.1-201ENST00000569130 274 ntBASIC16.3■□□□□ 0.2
HERVK_113Q902F9 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 MIR4649-201ENST00000582839 64 ntBASIC16.3■□□□□ 0.2
HERVK_113Q902F9 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERVK_113Q902F9 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 FAM90A7P-201ENST00000382628 1395 ntBASIC16.29■□□□□ 0.2
HERVK_113Q902F9 FAM90A23P-201ENST00000400136 1395 ntBASIC16.29■□□□□ 0.2
HERVK_113Q902F9 FAM90A2P-201ENST00000511144 1395 ntBASIC16.29■□□□□ 0.2
HERVK_113Q902F9 FAM90A25P-201ENST00000528404 1395 ntBASIC16.29■□□□□ 0.2
HERVK_113Q902F9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 OR2K2-202ENST00000374428 1038 ntBASIC16.29■□□□□ 0.2
HERVK_113Q902F9 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 AC007718.1-201ENST00000621078 280 ntBASIC16.29■□□□□ 0.2
HERVK_113Q902F9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERVK_113Q902F9 AC046158.3-201ENST00000624947 2558 ntBASIC16.29■□□□□ 0.2
HERVK_113Q902F9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 KLF2P1-201ENST00000447438 1042 ntBASIC16.28■□□□□ 0.2
HERVK_113Q902F9 AC130709.1-201ENST00000484779 1212 ntBASIC16.28■□□□□ 0.2
HERVK_113Q902F9 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERVK_113Q902F9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms