Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 AC114501.1-201ENST00000445949 172 ntBASIC12.09□□□□□ -0.47
C3orf56Q8N813 AL596276.2-201ENST00000447525 331 ntBASIC12.09□□□□□ -0.47
C3orf56Q8N813 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 AC100757.4-201ENST00000626934 759 ntBASIC12.09□□□□□ -0.47
C3orf56Q8N813 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
C3orf56Q8N813 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.08□□□□□ -0.47
C3orf56Q8N813 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 AL355334.1-201ENST00000417713 215 ntBASIC12.08□□□□□ -0.48
C3orf56Q8N813 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 AC021723.1-201ENST00000486306 515 ntBASIC12.08□□□□□ -0.48
C3orf56Q8N813 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 PRKXP1-201ENST00000561423 1122 ntBASIC12.08□□□□□ -0.48
C3orf56Q8N813 RN7SL48P-201ENST00000579283 293 ntBASIC12.08□□□□□ -0.48
C3orf56Q8N813 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.08□□□□□ -0.48
C3orf56Q8N813 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
C3orf56Q8N813 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms