Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTTNQ86VV8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.68□□□□□ -0.22
RTTNQ86VV8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
RTTNQ86VV8 AC138969.3-201ENST00000546612 1459 ntBASIC13.68□□□□□ -0.22
RTTNQ86VV8 AC138932.2-201ENST00000548268 1459 ntBASIC13.68□□□□□ -0.22
RTTNQ86VV8 AC126755.4-201ENST00000549796 1459 ntBASIC13.68□□□□□ -0.22
RTTNQ86VV8 REXO1L2P-201ENST00000425429 2069 ntBASIC13.68□□□□□ -0.22
RTTNQ86VV8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTTNQ86VV8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTTNQ86VV8 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTTNQ86VV8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTTNQ86VV8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RTTNQ86VV8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.68□□□□□ -0.22
RTTNQ86VV8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.68□□□□□ -0.22
RTTNQ86VV8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 REXO1L6P-201ENST00000603433 1515 ntBASIC13.67□□□□□ -0.22
RTTNQ86VV8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 AC127383.1-201ENST00000444697 1800 ntBASIC13.67□□□□□ -0.22
RTTNQ86VV8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 AC092506.1-202ENST00000401022 528 ntBASIC13.67□□□□□ -0.22
RTTNQ86VV8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.67□□□□□ -0.22
RTTNQ86VV8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTTNQ86VV8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 AL353779.1-201ENST00000434793 351 ntBASIC13.66□□□□□ -0.22
RTTNQ86VV8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 RN7SL837P-201ENST00000463010 287 ntBASIC13.66□□□□□ -0.22
RTTNQ86VV8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 SDHAP3-202ENST00000515467 728 ntBASIC13.66□□□□□ -0.22
RTTNQ86VV8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 SNX29P1-201ENST00000548357 1007 ntBASIC13.66□□□□□ -0.22
RTTNQ86VV8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 AC022532.1-201ENST00000624563 1728 ntBASIC13.66□□□□□ -0.22
RTTNQ86VV8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 AC087499.5-201ENST00000452760 1342 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms