Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 MAPK10-262ENST00000641051 5738 ntBASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 SPDYE13P-201ENST00000445314 798 ntBASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 AC096582.2-201ENST00000510860 516 ntBASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 AL591122.2-201ENST00000624125 1853 ntBASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP4Q6PIL6 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 TOB2P1-201ENST00000469761 992 ntBASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 FAM86EP-206ENST00000510506 987 ntBASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AP000867.3-201ENST00000524675 377 ntBASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AC005336.2-201ENST00000593183 939 ntBASIC12□□□□□ -0.49
KCNIP4Q6PIL6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AL365330.1-201ENST00000607459 531 ntBASIC12□□□□□ -0.49
KCNIP4Q6PIL6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP4Q6PIL6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms