Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 LINC01101-201ENST00000622953 1884 ntBASIC15.78■□□□□ 0.12
CASC4Q6P4E1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.78■□□□□ 0.12
CASC4Q6P4E1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASC4Q6P4E1 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.77■□□□□ 0.12
CASC4Q6P4E1 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 AC013726.1-201ENST00000563747 2285 ntBASIC15.77■□□□□ 0.12
CASC4Q6P4E1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 SLED1-202ENST00000512051 380 ntBASIC15.77■□□□□ 0.12
CASC4Q6P4E1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 LINC00628-201ENST00000628516 1289 ntBASIC15.77■□□□□ 0.12
CASC4Q6P4E1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 AC134684.3-201ENST00000641758 218 ntBASIC15.77■□□□□ 0.12
CASC4Q6P4E1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.77■□□□□ 0.12
CASC4Q6P4E1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms