Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 AL137013.1-201ENST00000432946 1228 ntBASIC11.7□□□□□ -0.54
MRPL54Q6P161 KRT17P6-201ENST00000453795 1220 ntBASIC11.7□□□□□ -0.54
MRPL54Q6P161 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 MIR4497-201ENST00000583208 89 ntBASIC11.7□□□□□ -0.54
MRPL54Q6P161 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL54Q6P161 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL54Q6P161 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 AC105206.1-202ENST00000314927 2368 ntBASIC11.69□□□□□ -0.54
MRPL54Q6P161 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
MRPL54Q6P161 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL54Q6P161 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
MRPL54Q6P161 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
MRPL54Q6P161 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL54Q6P161 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.68□□□□□ -0.54
MRPL54Q6P161 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms