Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 MIR6746-201ENST00000620971 63 ntBASIC14.67□□□□□ -0.06
RIF1Q5UIP0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIF1Q5UIP0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 AC020931.1-201ENST00000589622 1346 ntBASIC14.66□□□□□ -0.06
RIF1Q5UIP0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 AC100827.2-201ENST00000563214 1194 ntBASIC14.66□□□□□ -0.06
RIF1Q5UIP0 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms