Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.03□□□□□ -0.64
UBE2D3P61077 AC023024.2-201ENST00000623561 1993 ntBASIC11.03□□□□□ -0.64
UBE2D3P61077 OR2I1P-209ENST00000641730 5365 ntBASIC11.03□□□□□ -0.64
UBE2D3P61077 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
UBE2D3P61077 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 TCAF1P1-201ENST00000414990 2232 ntBASIC11.03□□□□□ -0.64
UBE2D3P61077 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D3P61077 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D3P61077 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
UBE2D3P61077 AL627223.1-201ENST00000416693 442 ntBASIC11.03□□□□□ -0.64
UBE2D3P61077 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D3P61077 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 BANF1P1-201ENST00000553684 263 ntBASIC11.03□□□□□ -0.64
UBE2D3P61077 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D3P61077 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
UBE2D3P61077 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D3P61077 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D3P61077 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D3P61077 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
UBE2D3P61077 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2D3P61077 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
UBE2D3P61077 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.02□□□□□ -0.64
UBE2D3P61077 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
UBE2D3P61077 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
UBE2D3P61077 AGAP7P-201ENST00000582299 2062 ntBASIC11.02□□□□□ -0.64
UBE2D3P61077 AGAP14-201ENST00000624701 2060 ntBASIC11.02□□□□□ -0.64
UBE2D3P61077 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2D3P61077 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.02□□□□□ -0.64
UBE2D3P61077 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.02□□□□□ -0.64
UBE2D3P61077 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2D3P61077 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2D3P61077 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D3P61077 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D3P61077 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D3P61077 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D3P61077 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D3P61077 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D3P61077 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D3P61077 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2D3P61077 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2D3P61077 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2D3P61077 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D3P61077 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UBE2D3P61077 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D3P61077 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
UBE2D3P61077 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2D3P61077 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
UBE2D3P61077 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2D3P61077 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D3P61077 FAM58DP-201ENST00000428076 619 ntBASIC11.02□□□□□ -0.65
UBE2D3P61077 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.02□□□□□ -0.65
UBE2D3P61077 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D3P61077 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms