Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.15□□□□□ -0.14
CDC42P60953 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.15□□□□□ -0.14
CDC42P60953 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
CDC42P60953 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
CDC42P60953 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC42P60953 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CDC42P60953 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.14□□□□□ -0.15
CDC42P60953 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDC42P60953 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDC42P60953 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC42P60953 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.14□□□□□ -0.15
CDC42P60953 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.14□□□□□ -0.15
CDC42P60953 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC42P60953 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.14□□□□□ -0.15
CDC42P60953 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CDC42P60953 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CDC42P60953 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC42P60953 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.14□□□□□ -0.15
CDC42P60953 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CDC42P60953 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.14□□□□□ -0.15
CDC42P60953 AP000845.1-201ENST00000581677 2131 ntBASIC14.14□□□□□ -0.15
CDC42P60953 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 AKAP8P1-201ENST00000434743 1349 ntBASIC14.14□□□□□ -0.15
CDC42P60953 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42P60953 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC42P60953 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.13□□□□□ -0.15
CDC42P60953 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 PEG13-201ENST00000631594 5667 ntBASIC14.13□□□□□ -0.15
CDC42P60953 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.13□□□□□ -0.15
CDC42P60953 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CDC42P60953 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 EMBP1-201ENST00000458200 901 ntBASIC14.13□□□□□ -0.15
CDC42P60953 RNA5SP415-201ENST00000517246 115 ntBASIC14.13□□□□□ -0.15
CDC42P60953 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 AC027307.2-201ENST00000591252 911 ntBASIC14.13□□□□□ -0.15
CDC42P60953 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.13□□□□□ -0.15
CDC42P60953 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.13□□□□□ -0.15
CDC42P60953 MIR7706-201ENST00000613747 67 ntBASIC14.13□□□□□ -0.15
CDC42P60953 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms