Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN20P56880 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 SLC7A15P-201ENST00000424028 1363 ntBASIC14.18□□□□□ -0.14
CLDN20P56880 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLDN20P56880 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN20P56880 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN20P56880 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN20P56880 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN20P56880 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CLDN20P56880 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN20P56880 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN20P56880 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLDN20P56880 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN20P56880 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CLDN20P56880 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN20P56880 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN20P56880 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLDN20P56880 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 AL353779.1-201ENST00000434793 351 ntBASIC14.17□□□□□ -0.14
CLDN20P56880 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN20P56880 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN20P56880 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLDN20P56880 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.17□□□□□ -0.14
CLDN20P56880 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.17□□□□□ -0.14
CLDN20P56880 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN20P56880 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN20P56880 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.17□□□□□ -0.14
CLDN20P56880 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
CLDN20P56880 SPDYE22P-201ENST00000582158 798 ntBASIC14.17□□□□□ -0.14
CLDN20P56880 CHCHD2P3-201ENST00000603038 451 ntBASIC14.17□□□□□ -0.14
CLDN20P56880 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CLDN20P56880 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLDN20P56880 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN20P56880 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN20P56880 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 AC005840.4-201ENST00000541242 2494 ntBASIC14.17□□□□□ -0.14
CLDN20P56880 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN20P56880 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN20P56880 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN20P56880 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN20P56880 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLDN20P56880 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLDN20P56880 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CLDN20P56880 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN20P56880 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN20P56880 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
CLDN20P56880 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN20P56880 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN20P56880 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CLDN20P56880 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.16□□□□□ -0.14
CLDN20P56880 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.16□□□□□ -0.14
CLDN20P56880 AC055876.2-201ENST00000531834 546 ntBASIC14.16□□□□□ -0.14
CLDN20P56880 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CLDN20P56880 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN20P56880 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CLDN20P56880 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CLDN20P56880 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms