Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.62□□□□□ -0.39
CEACAM3P40198 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.62□□□□□ -0.39
CEACAM3P40198 RN7SL399P-201ENST00000471648 279 ntBASIC12.62□□□□□ -0.39
CEACAM3P40198 FAM86LP-201ENST00000478302 853 ntBASIC12.62□□□□□ -0.39
CEACAM3P40198 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.62□□□□□ -0.39
CEACAM3P40198 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.62□□□□□ -0.39
CEACAM3P40198 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.62□□□□□ -0.39
CEACAM3P40198 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.62□□□□□ -0.39
CEACAM3P40198 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.62□□□□□ -0.39
CEACAM3P40198 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CEACAM3P40198 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.61□□□□□ -0.39
CEACAM3P40198 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.61□□□□□ -0.39
CEACAM3P40198 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CEACAM3P40198 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.61□□□□□ -0.39
CEACAM3P40198 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CEACAM3P40198 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 GNAQP1-201ENST00000444815 1067 ntBASIC12.61□□□□□ -0.39
CEACAM3P40198 AL589987.1-201ENST00000453380 819 ntBASIC12.61□□□□□ -0.39
CEACAM3P40198 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.61□□□□□ -0.39
CEACAM3P40198 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CEACAM3P40198 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.61□□□□□ -0.39
CEACAM3P40198 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.61□□□□□ -0.39
CEACAM3P40198 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CEACAM3P40198 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.61□□□□□ -0.39
CEACAM3P40198 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 AL645728.2-202ENST00000641679 227 ntBASIC12.61□□□□□ -0.39
CEACAM3P40198 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CEACAM3P40198 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CEACAM3P40198 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CEACAM3P40198 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.6□□□□□ -0.39
CEACAM3P40198 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.6□□□□□ -0.39
CEACAM3P40198 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.6□□□□□ -0.39
CEACAM3P40198 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms