Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SNCAP37840 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SNCAP37840 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
SNCAP37840 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.75□□□□□ -0.37
SNCAP37840 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.75□□□□□ -0.37
SNCAP37840 AC074386.1-202ENST00000463561 864 ntBASIC12.75□□□□□ -0.37
SNCAP37840 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SNCAP37840 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SNCAP37840 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
SNCAP37840 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 AC104692.2-201ENST00000603054 253 ntBASIC12.75□□□□□ -0.37
SNCAP37840 AC064836.3-201ENST00000607928 673 ntBASIC12.75□□□□□ -0.37
SNCAP37840 DGCR9-201ENST00000609630 2415 ntBASIC12.75□□□□□ -0.37
SNCAP37840 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SNCAP37840 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.75□□□□□ -0.37
SNCAP37840 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNCAP37840 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNCAP37840 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
SNCAP37840 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.74□□□□□ -0.37
SNCAP37840 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.74□□□□□ -0.37
SNCAP37840 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SNCAP37840 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SNCAP37840 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
SNCAP37840 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNCAP37840 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNCAP37840 ZBED1P1-201ENST00000502364 1930 ntBASIC12.74□□□□□ -0.37
SNCAP37840 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNCAP37840 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNCAP37840 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
SNCAP37840 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.74□□□□□ -0.37
SNCAP37840 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNCAP37840 AL359881.3-201ENST00000602640 1721 ntBASIC12.74□□□□□ -0.37
SNCAP37840 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SNCAP37840 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNCAP37840 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNCAP37840 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms