Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.8■□□□□ 0.28
ABCD1P33897 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD1P33897 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD1P33897 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
ABCD1P33897 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.8■□□□□ 0.28
ABCD1P33897 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD1P33897 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ABCD1P33897 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.8■□□□□ 0.28
ABCD1P33897 BAATP1-201ENST00000412284 1225 ntBASIC16.8■□□□□ 0.28
ABCD1P33897 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
ABCD1P33897 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.8■□□□□ 0.28
ABCD1P33897 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 AC012441.1-201ENST00000446669 685 ntBASIC16.8■□□□□ 0.28
ABCD1P33897 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD1P33897 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.8■□□□□ 0.28
ABCD1P33897 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD1P33897 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.8■□□□□ 0.28
ABCD1P33897 MIR5189-201ENST00000577370 114 ntBASIC16.8■□□□□ 0.28
ABCD1P33897 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.8■□□□□ 0.28
ABCD1P33897 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.8■□□□□ 0.28
ABCD1P33897 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD1P33897 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ABCD1P33897 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD1P33897 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ABCD1P33897 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD1P33897 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD1P33897 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.8■□□□□ 0.28
ABCD1P33897 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD1P33897 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD1P33897 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
ABCD1P33897 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD1P33897 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD1P33897 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.79■□□□□ 0.28
ABCD1P33897 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ABCD1P33897 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 KLF2P2-201ENST00000416807 1039 ntBASIC16.79■□□□□ 0.28
ABCD1P33897 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.79■□□□□ 0.28
ABCD1P33897 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.79■□□□□ 0.28
ABCD1P33897 GAPDHP21-201ENST00000450301 1010 ntBASIC16.79■□□□□ 0.28
ABCD1P33897 INE1-201ENST00000456273 945 ntBASIC16.79■□□□□ 0.28
ABCD1P33897 AC093433.1-201ENST00000458048 571 ntBASIC16.79■□□□□ 0.28
ABCD1P33897 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.79■□□□□ 0.28
ABCD1P33897 GIMAP3P-201ENST00000495150 836 ntBASIC16.79■□□□□ 0.28
ABCD1P33897 AC022616.1-201ENST00000518688 554 ntBASIC16.79■□□□□ 0.28
ABCD1P33897 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ABCD1P33897 AC068587.3-201ENST00000526613 355 ntBASIC16.79■□□□□ 0.28
ABCD1P33897 TDH-203ENST00000531764 1110 ntBASIC16.79■□□□□ 0.28
ABCD1P33897 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD1P33897 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ABCD1P33897 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD1P33897 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
ABCD1P33897 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.79■□□□□ 0.28
ABCD1P33897 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ABCD1P33897 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD1P33897 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD1P33897 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD1P33897 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.78■□□□□ 0.28
ABCD1P33897 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD1P33897 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD1P33897 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms