Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.16■□□□□ 0.18
MMP8P22894 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.16■□□□□ 0.18
MMP8P22894 AL442647.2-201ENST00000429864 857 ntBASIC16.16■□□□□ 0.18
MMP8P22894 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.16■□□□□ 0.18
MMP8P22894 AC104596.2-201ENST00000512793 793 ntBASIC16.16■□□□□ 0.18
MMP8P22894 AC092552.1-201ENST00000547243 906 ntBASIC16.16■□□□□ 0.18
MMP8P22894 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.16■□□□□ 0.18
MMP8P22894 RN7SL204P-201ENST00000582831 262 ntBASIC16.16■□□□□ 0.18
MMP8P22894 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.16■□□□□ 0.18
MMP8P22894 AL132655.2-201ENST00000596276 594 ntBASIC16.16■□□□□ 0.18
MMP8P22894 LINC02560-201ENST00000596379 459 ntBASIC16.16■□□□□ 0.18
MMP8P22894 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.16■□□□□ 0.18
MMP8P22894 AC008761.3-201ENST00000624803 892 ntBASIC16.16■□□□□ 0.18
MMP8P22894 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.16■□□□□ 0.18
MMP8P22894 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MMP8P22894 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.16■□□□□ 0.18
MMP8P22894 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MMP8P22894 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.15■□□□□ 0.18
MMP8P22894 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.15■□□□□ 0.18
MMP8P22894 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.15■□□□□ 0.18
MMP8P22894 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.15■□□□□ 0.18
MMP8P22894 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MMP8P22894 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MMP8P22894 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.15■□□□□ 0.18
MMP8P22894 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
MMP8P22894 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.15■□□□□ 0.18
MMP8P22894 AC134915.1-201ENST00000426461 574 ntBASIC16.15■□□□□ 0.18
MMP8P22894 HLA-K-203ENST00000430151 1046 ntBASIC16.15■□□□□ 0.18
MMP8P22894 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.15■□□□□ 0.18
MMP8P22894 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MMP8P22894 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.15■□□□□ 0.18
MMP8P22894 AC123567.1-201ENST00000548294 1261 ntBASIC16.15■□□□□ 0.18
MMP8P22894 AC124283.3-201ENST00000570869 594 ntBASIC16.15■□□□□ 0.18
MMP8P22894 CHCHD2P3-201ENST00000603038 451 ntBASIC16.15■□□□□ 0.18
MMP8P22894 AC004233.3-201ENST00000607794 1269 ntBASIC16.15■□□□□ 0.18
MMP8P22894 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
MMP8P22894 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
MMP8P22894 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MMP8P22894 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP8P22894 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MMP8P22894 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.14■□□□□ 0.18
MMP8P22894 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
MMP8P22894 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP8P22894 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP8P22894 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
MMP8P22894 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP8P22894 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP8P22894 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP8P22894 AC087499.6-201ENST00000411576 835 ntBASIC16.14■□□□□ 0.17
MMP8P22894 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP8P22894 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.14■□□□□ 0.17
MMP8P22894 AC002472.2-201ENST00000442739 958 ntBASIC16.14■□□□□ 0.17
MMP8P22894 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP8P22894 API5-211ENST00000534695 560 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP8P22894 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP8P22894 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.14■□□□□ 0.17
MMP8P22894 TMEM261P1-201ENST00000604899 340 ntBASIC16.14■□□□□ 0.17
MMP8P22894 AL355385.1-201ENST00000606123 409 ntBASIC16.14■□□□□ 0.17
MMP8P22894 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP8P22894 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.14■□□□□ 0.17
MMP8P22894 PRSS30P-206ENST00000641773 873 ntBASIC16.14■□□□□ 0.17
MMP8P22894 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP8P22894 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms