Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ITGB4P16144 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.17■□□□□ 0.66
ITGB4P16144 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 AL513523.2-202ENST00000427283 2040 ntBASIC19.17■□□□□ 0.66
ITGB4P16144 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.17■□□□□ 0.66
ITGB4P16144 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGB4P16144 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ITGB4P16144 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGB4P16144 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGB4P16144 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.16■□□□□ 0.66
ITGB4P16144 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
ITGB4P16144 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC19.16■□□□□ 0.66
ITGB4P16144 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.16■□□□□ 0.66
ITGB4P16144 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.16■□□□□ 0.66
ITGB4P16144 AC009884.2-201ENST00000603110 324 ntBASIC19.16■□□□□ 0.66
ITGB4P16144 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGB4P16144 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ITGB4P16144 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGB4P16144 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.16■□□□□ 0.66
ITGB4P16144 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGB4P16144 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ITGB4P16144 REXO1L2P-201ENST00000425429 2069 ntBASIC19.16■□□□□ 0.66
ITGB4P16144 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
ITGB4P16144 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.16■□□□□ 0.66
ITGB4P16144 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGB4P16144 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 MIR557-201ENST00000385239 98 ntBASIC19.16■□□□□ 0.66
ITGB4P16144 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.16■□□□□ 0.66
ITGB4P16144 RN7SL81P-201ENST00000493781 261 ntBASIC19.16■□□□□ 0.66
ITGB4P16144 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGB4P16144 POU5F1P2-201ENST00000521750 823 ntBASIC19.16■□□□□ 0.66
ITGB4P16144 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
ITGB4P16144 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC19.16■□□□□ 0.66
ITGB4P16144 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC19.16■□□□□ 0.66
ITGB4P16144 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC19.16■□□□□ 0.66
ITGB4P16144 MIR6756-201ENST00000616240 63 ntBASIC19.16■□□□□ 0.66
ITGB4P16144 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGB4P16144 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGB4P16144 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGB4P16144 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.16■□□□□ 0.66
ITGB4P16144 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.15■□□□□ 0.66
ITGB4P16144 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC19.15■□□□□ 0.66
ITGB4P16144 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC19.15■□□□□ 0.66
ITGB4P16144 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.15■□□□□ 0.66
ITGB4P16144 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ITGB4P16144 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.15■□□□□ 0.66
ITGB4P16144 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC19.15■□□□□ 0.66
ITGB4P16144 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 TPM1-223ENST00000560445 485 ntTSL 3 BASIC19.15■□□□□ 0.66
ITGB4P16144 DNM1P30-201ENST00000563586 452 ntBASIC19.15■□□□□ 0.66
ITGB4P16144 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.15■□□□□ 0.66
ITGB4P16144 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.15■□□□□ 0.66
ITGB4P16144 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.15■□□□□ 0.66
ITGB4P16144 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ITGB4P16144 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.15■□□□□ 0.66
ITGB4P16144 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGB4P16144 SALL4P5-201ENST00000419001 1760 ntBASIC19.14■□□□□ 0.66
ITGB4P16144 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.14■□□□□ 0.66
ITGB4P16144 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ITGB4P16144 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ITGB4P16144 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ITGB4P16144 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ITGB4P16144 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
ITGB4P16144 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ITGB4P16144 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ITGB4P16144 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms