Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 AL157414.3-201ENST00000624276 1954 ntBASIC15.59■□□□□ 0.09
HLA-DQB2P05538 AL158070.2-201ENST00000623713 1621 ntBASIC15.59■□□□□ 0.09
HLA-DQB2P05538 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 SPDYE22P-201ENST00000582158 798 ntBASIC15.59■□□□□ 0.09
HLA-DQB2P05538 AC138761.1-201ENST00000584393 385 ntBASIC15.59■□□□□ 0.09
HLA-DQB2P05538 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 WFDC1-204ENST00000613603 549 ntBASIC15.59■□□□□ 0.09
HLA-DQB2P05538 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DQB2P05538 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 DGCR5-201ENST00000399539 862 ntBASIC15.58■□□□□ 0.08
HLA-DQB2P05538 SOCS2P1-201ENST00000417727 557 ntBASIC15.58■□□□□ 0.08
HLA-DQB2P05538 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.58■□□□□ 0.08
HLA-DQB2P05538 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HLA-DQB2P05538 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 AJ011931.1-201ENST00000618749 2492 ntBASIC15.57■□□□□ 0.08
HLA-DQB2P05538 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms