Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 AC005912.2-201ENST00000619492 2400 ntBASIC15.78■□□□□ 0.12
MT-ND3P03897 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND3P03897 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
MT-ND3P03897 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.78■□□□□ 0.12
MT-ND3P03897 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 AC139749.1-202ENST00000617529 3139 ntBASIC15.78■□□□□ 0.12
MT-ND3P03897 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND3P03897 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
MT-ND3P03897 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MT-ND3P03897 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.78■□□□□ 0.12
MT-ND3P03897 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
MT-ND3P03897 MIR346-201ENST00000362234 95 ntBASIC15.78■□□□□ 0.12
MT-ND3P03897 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
MT-ND3P03897 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND3P03897 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND3P03897 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.78■□□□□ 0.12
MT-ND3P03897 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.78■□□□□ 0.12
MT-ND3P03897 ALG1L8P-201ENST00000533887 760 ntBASIC15.78■□□□□ 0.12
MT-ND3P03897 SLC25A39P2-201ENST00000537614 270 ntBASIC15.78■□□□□ 0.12
MT-ND3P03897 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.78■□□□□ 0.12
MT-ND3P03897 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.78■□□□□ 0.12
MT-ND3P03897 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.78■□□□□ 0.12
MT-ND3P03897 MIR4745-201ENST00000577608 62 ntBASIC15.78■□□□□ 0.12
MT-ND3P03897 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.78■□□□□ 0.12
MT-ND3P03897 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.78■□□□□ 0.12
MT-ND3P03897 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
MT-ND3P03897 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
MT-ND3P03897 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
MT-ND3P03897 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.78■□□□□ 0.12
MT-ND3P03897 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND3P03897 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.77■□□□□ 0.12
MT-ND3P03897 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.77■□□□□ 0.12
MT-ND3P03897 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
MT-ND3P03897 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
MT-ND3P03897 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.77■□□□□ 0.12
MT-ND3P03897 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.77■□□□□ 0.12
MT-ND3P03897 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-ND3P03897 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.77■□□□□ 0.12
MT-ND3P03897 SPDYE14P-201ENST00000442619 822 ntBASIC15.77■□□□□ 0.12
MT-ND3P03897 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.77■□□□□ 0.12
MT-ND3P03897 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-ND3P03897 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.77■□□□□ 0.12
MT-ND3P03897 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-ND3P03897 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 MIR6080-201ENST00000617359 66 ntBASIC15.77■□□□□ 0.12
MT-ND3P03897 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.77■□□□□ 0.12
MT-ND3P03897 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND3P03897 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
MT-ND3P03897 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
MT-ND3P03897 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND3P03897 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND3P03897 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND3P03897 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
MT-ND3P03897 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
MT-ND3P03897 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.77■□□□□ 0.11
MT-ND3P03897 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND3P03897 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.77■□□□□ 0.11
MT-ND3P03897 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.77■□□□□ 0.11
MT-ND3P03897 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND3P03897 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
MT-ND3P03897 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND3P03897 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
MT-ND3P03897 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND3P03897 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND3P03897 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND3P03897 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND3P03897 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms