Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCNKO75909 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCNKO75909 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CCNKO75909 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCNKO75909 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCNKO75909 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CCNKO75909 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCNKO75909 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCNKO75909 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CCNKO75909 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CCNKO75909 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCNKO75909 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.4□□□□□ -0.26
CCNKO75909 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CCNKO75909 TERF1P1-201ENST00000311003 1181 ntBASIC13.4□□□□□ -0.26
CCNKO75909 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 AL645939.2-201ENST00000427340 991 ntBASIC13.4□□□□□ -0.26
CCNKO75909 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.4□□□□□ -0.26
CCNKO75909 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.4□□□□□ -0.26
CCNKO75909 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 IGHV3-41-201ENST00000613121 348 ntBASIC13.4□□□□□ -0.26
CCNKO75909 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCNKO75909 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.4□□□□□ -0.26
CCNKO75909 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.4□□□□□ -0.26
CCNKO75909 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.4□□□□□ -0.26
CCNKO75909 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.4□□□□□ -0.26
CCNKO75909 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCNKO75909 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CCNKO75909 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.4□□□□□ -0.26
CCNKO75909 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCNKO75909 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCNKO75909 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.4□□□□□ -0.26
CCNKO75909 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCNKO75909 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCNKO75909 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CCNKO75909 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
CCNKO75909 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CCNKO75909 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCNKO75909 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.39□□□□□ -0.27
CCNKO75909 AC131009.4-201ENST00000624048 1740 ntBASIC13.39□□□□□ -0.27
CCNKO75909 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CCNKO75909 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.39□□□□□ -0.27
CCNKO75909 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCNKO75909 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.39□□□□□ -0.27
CCNKO75909 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 HOMER2P1-201ENST00000455653 964 ntBASIC13.39□□□□□ -0.27
CCNKO75909 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.39□□□□□ -0.27
CCNKO75909 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCNKO75909 AC009533.2-201ENST00000543664 586 ntBASIC13.39□□□□□ -0.27
CCNKO75909 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.39□□□□□ -0.27
CCNKO75909 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.39□□□□□ -0.27
CCNKO75909 AC011467.2-201ENST00000598425 242 ntBASIC13.39□□□□□ -0.27
CCNKO75909 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.39□□□□□ -0.27
CCNKO75909 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.39□□□□□ -0.27
CCNKO75909 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 AC068760.1-201ENST00000493579 1953 ntBASIC13.39□□□□□ -0.27
CCNKO75909 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.39□□□□□ -0.27
CCNKO75909 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms