Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 MIR3687-2-201ENST00000577708 61 ntBASIC15.12■□□□□ 0.01
DLX3O60479 MIR3687-1-201ENST00000614492 61 ntBASIC15.12■□□□□ 0.01
DLX3O60479 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
DLX3O60479 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.12■□□□□ 0.01
DLX3O60479 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.12■□□□□ 0.01
DLX3O60479 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.12■□□□□ 0.01
DLX3O60479 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.12■□□□□ 0.01
DLX3O60479 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.12■□□□□ 0.01
DLX3O60479 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
DLX3O60479 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DLX3O60479 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.12■□□□□ 0.01
DLX3O60479 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
DLX3O60479 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.12■□□□□ 0.01
DLX3O60479 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.11■□□□□ 0.01
DLX3O60479 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.11■□□□□ 0.01
DLX3O60479 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
DLX3O60479 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
DLX3O60479 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
DLX3O60479 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
DLX3O60479 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
DLX3O60479 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.11■□□□□ 0.01
DLX3O60479 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
DLX3O60479 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.11■□□□□ 0.01
DLX3O60479 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 MIR1233-2-201ENST00000408138 82 ntBASIC15.11■□□□□ 0.01
DLX3O60479 MIR1233-1-201ENST00000408722 82 ntBASIC15.11■□□□□ 0.01
DLX3O60479 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.11■□□□□ 0.01
DLX3O60479 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.11■□□□□ 0.01
DLX3O60479 KRT18P43-201ENST00000469825 1281 ntBASIC15.11■□□□□ 0.01
DLX3O60479 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.11■□□□□ 0.01
DLX3O60479 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.11■□□□□ 0.01
DLX3O60479 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.11■□□□□ 0.01
DLX3O60479 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.11■□□□□ 0.01
DLX3O60479 AC113367.3-201ENST00000508316 1912 ntBASIC15.11■□□□□ 0.01
DLX3O60479 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.11■□□□□ 0.01
DLX3O60479 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.11■□□□□ 0.01
DLX3O60479 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
DLX3O60479 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
DLX3O60479 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
DLX3O60479 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
DLX3O60479 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
DLX3O60479 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.1■□□□□ 0.01
DLX3O60479 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 UPF3AP3-201ENST00000420996 769 ntBASIC15.1■□□□□ 0.01
DLX3O60479 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.1■□□□□ 0.01
DLX3O60479 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.1■□□□□ 0.01
DLX3O60479 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.1■□□□□ 0.01
DLX3O60479 AC069262.1-201ENST00000539058 672 ntBASIC15.1■□□□□ 0.01
DLX3O60479 AC092865.5-201ENST00000545435 363 ntBASIC15.1■□□□□ 0.01
DLX3O60479 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.1■□□□□ 0.01
DLX3O60479 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.1■□□□□ 0.01
DLX3O60479 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.1■□□□□ 0.01
DLX3O60479 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.1■□□□□ 0.01
DLX3O60479 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.1■□□□□ 0.01
DLX3O60479 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.1■□□□□ 0.01
DLX3O60479 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
DLX3O60479 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.1■□□□□ 0.01
DLX3O60479 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.1■□□□□ 0.01
DLX3O60479 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DLX3O60479 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms