Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.53□□□□□ -0.56
SMIM27A0A1W2PRY6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SMIM27A0A1W2PRY6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
SMIM27A0A1W2PRY6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
SMIM27A0A1W2PRY6 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.52□□□□□ -0.56
SMIM27A0A1W2PRY6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
SMIM27A0A1W2PRY6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.52□□□□□ -0.56
SMIM27A0A1W2PRY6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.52□□□□□ -0.56
SMIM27A0A1W2PRY6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 AC073621.1-201ENST00000392730 636 ntBASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 AC092474.2-201ENST00000424288 719 ntBASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 AC136632.2-201ENST00000512891 861 ntBASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 AL355877.3-201ENST00000622820 899 ntBASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 AC005332.1-201ENST00000577698 1310 ntBASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SMIM27A0A1W2PRY6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 AC073548.1-201ENST00000624088 1882 ntBASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 INE2-201ENST00000630399 1874 ntBASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 CXCL1P1-201ENST00000502804 216 ntBASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 AC025062.2-201ENST00000605477 670 ntBASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 SPTSSB-204ENST00000617024 1292 ntBASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 AL121956.5-201ENST00000625261 221 ntBASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.51□□□□□ -0.57
SMIM27A0A1W2PRY6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms