Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 AC073957.3-201ENST00000609998 6758 ntBASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 AC010970.1-201ENST00000445125 1848 ntBASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CYP2T1P-201ENST00000432607 1285 ntBASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 F2R-202ENST00000505600 442 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 MIR4466-201ENST00000606121 54 ntBASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 TNRC18P1-201ENST00000502875 3650 ntBASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 AL445209.1-201ENST00000607269 3491 ntBASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LPP-AS2-201ENST00000605573 2852 ntBASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
LINC01558Q9Y6Z2 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 NBPF21P-201ENST00000425093 1451 ntBASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
LINC01558Q9Y6Z2 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms