Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.91□□□□□ -0.02
AP4B1Q9Y6B7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 MBLAC2-202ENST00000514906 1936 ntBASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 AC005237.2-201ENST00000434368 219 ntBASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 SPCS2P4-201ENST00000436160 681 ntBASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 CICP17-201ENST00000418553 2377 ntBASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
AP4B1Q9Y6B7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 AC027307.2-201ENST00000591252 911 ntBASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AP4B1Q9Y6B7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms