Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC006058.4-201ENST00000624016 1670 ntBASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 AL137244.1-201ENST00000422931 865 ntBASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 CDK4P1-201ENST00000454213 828 ntBASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 DUX4L50-201ENST00000455245 715 ntBASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 RN7SL578P-201ENST00000477781 283 ntBASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 AC025186.1-201ENST00000478174 870 ntBASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 CLPP-205ENST00000596605 646 ntTSL 2 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 CYP4F23P-201ENST00000593402 1579 ntBASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL25A1Q9BXS0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 GEMIN8P4-201ENST00000380526 729 ntBASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 RPL18AP15-201ENST00000430258 517 ntBASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 AL773545.2-201ENST00000442149 472 ntBASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 AC112220.4-201ENST00000604982 1263 ntBASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 LINC00244-201ENST00000625073 613 ntBASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL25A1Q9BXS0 AC018892.3-201ENST00000623986 2499 ntBASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 FUCA1P1-201ENST00000374476 1351 ntBASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 AL136172.1-201ENST00000598590 1394 ntBASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.12■□□□□ 0.01
COL25A1Q9BXS0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms