Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AC254562.1-201ENST00000417586 456 ntBASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 CNN2P11-201ENST00000429351 262 ntBASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AC105021.1-202ENST00000570572 669 ntBASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AL450472.2-201ENST00000603663 1156 ntBASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AC023511.2-201ENST00000618803 211 ntBASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.34□□□□□ -0.43
CHRDL1Q9BU40 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.33□□□□□ -0.43
CHRDL1Q9BU40 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CHRDL1Q9BU40 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CHRDL1Q9BU40 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CHRDL1Q9BU40 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 CICP24-201ENST00000605464 2705 ntBASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 AL122018.1-201ENST00000446607 2310 ntBASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.33□□□□□ -0.44
CHRDL1Q9BU40 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms