Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 CYMP-203ENST00000474680 1263 ntBASIC15.03■□□□□ -0
PDLIM5Q96HC4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 AC093004.1-201ENST00000508850 424 ntBASIC15.03■□□□□ -0
PDLIM5Q96HC4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 AL049840.4-201ENST00000602422 811 ntBASIC15.03■□□□□ -0
PDLIM5Q96HC4 AC107373.2-201ENST00000607735 490 ntBASIC15.03■□□□□ -0
PDLIM5Q96HC4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM5Q96HC4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM5Q96HC4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 NUS1P3-201ENST00000423502 862 ntBASIC15.02■□□□□ -0
PDLIM5Q96HC4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDLIM5Q96HC4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.02■□□□□ -0
PDLIM5Q96HC4 PRSS30P-206ENST00000641773 873 ntBASIC15.02■□□□□ -0
PDLIM5Q96HC4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM5Q96HC4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms