Protein–RNA interactions for Protein: Q8WWF1

C1orf54, Uncharacterized protein C1orf54, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54Q8WWF1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 MTHFR-210ENST00000641407 2387 ntBASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf54Q8WWF1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 AL080243.2-201ENST00000418783 582 ntBASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 AC023141.5-201ENST00000458585 616 ntBASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 MIR6069-201ENST00000620069 79 ntBASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 LINC00628-201ENST00000628516 1289 ntBASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 Z97205.2-201ENST00000564697 1639 ntBASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf54Q8WWF1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms