Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 TREHP1-201ENST00000531328 465 ntBASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 AC068867.1-201ENST00000559855 150 ntBASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 AC025183.3-201ENST00000623526 1482 ntBASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 REXO1L4P-201ENST00000605109 1937 ntBASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 AC006483.2-201ENST00000609813 515 ntBASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 PCDH8P1-201ENST00000428983 2773 ntBASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
ALMS1Q8TCU4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 HNRNPA1P58-201ENST00000403629 610 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 BANF1P3-201ENST00000412556 261 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 XBP1P1-201ENST00000436573 652 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 HLA-DQB1-202ENST00000399079 1501 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 AC003102.2-201ENST00000589195 1469 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 PYY2-201ENST00000315776 282 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 RN7SL81P-201ENST00000493781 261 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 FTLP5-201ENST00000586853 534 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 HMGB1P24-201ENST00000611897 328 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 CTSL-202ENST00000342020 933 ntTSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms