Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 RPL13AP25-201ENST00000484130 612 ntBASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 AC093214.1-201ENST00000511688 1107 ntBASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 AL391069.4-201ENST00000609583 481 ntBASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 AC004840.1-201ENST00000636359 365 ntBASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF440Q8IYI8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 REXO1L2P-201ENST00000425429 2069 ntBASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 RFPL4AP1-201ENST00000530883 850 ntBASIC14.1□□□□□ -0.15
ZNF440Q8IYI8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms