Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC067930.6-201ENST00000623257 4947 ntBASIC16.39■□□□□ 0.21
RNF135Q8IUD6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 AC024909.3-201ENST00000611513 2257 ntBASIC16.38■□□□□ 0.21
RNF135Q8IUD6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 AL365203.3-201ENST00000609742 2057 ntBASIC16.38■□□□□ 0.21
RNF135Q8IUD6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 AC104457.1-201ENST00000401024 814 ntBASIC16.38■□□□□ 0.21
RNF135Q8IUD6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.38■□□□□ 0.21
RNF135Q8IUD6 MIR3619-201ENST00000579667 83 ntBASIC16.38■□□□□ 0.21
RNF135Q8IUD6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.38■□□□□ 0.21
RNF135Q8IUD6 MIR7845-201ENST00000618396 99 ntBASIC16.38■□□□□ 0.21
RNF135Q8IUD6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 AHCYP2-201ENST00000430630 1300 ntBASIC16.38■□□□□ 0.21
RNF135Q8IUD6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF135Q8IUD6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 AC022188.1-201ENST00000620960 1664 ntBASIC16.37■□□□□ 0.21
RNF135Q8IUD6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 CHMP4BP1-201ENST00000556017 588 ntBASIC16.37■□□□□ 0.21
RNF135Q8IUD6 AC138627.1-207ENST00000641560 1006 ntBASIC16.37■□□□□ 0.21
RNF135Q8IUD6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF135Q8IUD6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms