Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.9□□□□□ -0.34
ZNF546Q86UE3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
ZNF546Q86UE3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.9□□□□□ -0.35
ZNF546Q86UE3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.35
ZNF546Q86UE3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 PCED1CP-201ENST00000419887 785 ntBASIC12.89□□□□□ -0.35
ZNF546Q86UE3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 AC091076.1-201ENST00000610741 619 ntBASIC12.89□□□□□ -0.35
ZNF546Q86UE3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 AL805961.1-202ENST00000641562 540 ntBASIC12.89□□□□□ -0.35
ZNF546Q86UE3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ZNF546Q86UE3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 AC132008.2-207ENST00000454517 770 ntBASIC12.88□□□□□ -0.35
ZNF546Q86UE3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 NKAPP1-205ENST00000585790 367 ntBASIC12.88□□□□□ -0.35
ZNF546Q86UE3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 AC004706.3-202ENST00000621574 984 ntBASIC12.88□□□□□ -0.35
ZNF546Q86UE3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF546Q86UE3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms