Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 DRD5P1-201ENST00000456605 1438 ntBASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 KRT8P44-201ENST00000441609 1350 ntBASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 DGCR5-201ENST00000399539 862 ntBASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LYSMD3Q7Z3D4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 AC068587.6-202ENST00000641839 5619 ntBASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 INTS4P2-202ENST00000614726 2019 ntBASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 AC148477.4-201ENST00000613430 1793 ntBASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 GAPDHP21-201ENST00000450301 1010 ntBASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 TMEM261P1-201ENST00000604899 340 ntBASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 AC107373.2-201ENST00000607735 490 ntBASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 AL109954.1-202ENST00000564051 2148 ntBASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD3Q7Z3D4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 AC023024.2-201ENST00000623561 1993 ntBASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms