Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 LINC00265-3P-201ENST00000447588 903 ntBASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AC087641.1-201ENST00000557561 1021 ntBASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AP000550.4-202ENST00000639755 178 ntBASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AC148477.5-201ENST00000625164 1645 ntBASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 OR2I1P-208ENST00000641137 4948 ntBASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP4Q6PIL6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP4Q6PIL6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
KCNIP4Q6PIL6 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP4Q6PIL6 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP4Q6PIL6 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
KCNIP4Q6PIL6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP4Q6PIL6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP4Q6PIL6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP4Q6PIL6 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
KCNIP4Q6PIL6 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 AC104819.1-201ENST00000504587 486 ntBASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 AC097359.2-201ENST00000604992 2389 ntBASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 AL590787.1-201ENST00000568856 1315 ntBASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
KCNIP4Q6PIL6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms