Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
C11orf88Q6PI97 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.23
C11orf88Q6PI97 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.58□□□□□ -0.23
C11orf88Q6PI97 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
C11orf88Q6PI97 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
C11orf88Q6PI97 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 INTS4P1-203ENST00000641008 3683 ntBASIC13.58□□□□□ -0.24
C11orf88Q6PI97 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 HCG4-201ENST00000418983 998 ntBASIC13.58□□□□□ -0.24
C11orf88Q6PI97 PMS2P2-201ENST00000425039 1128 ntBASIC13.58□□□□□ -0.24
C11orf88Q6PI97 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 AC023141.13-201ENST00000604991 943 ntBASIC13.58□□□□□ -0.24
C11orf88Q6PI97 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C11orf88Q6PI97 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 C18orf15-201ENST00000623680 2534 ntBASIC13.57□□□□□ -0.24
C11orf88Q6PI97 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AC090616.6-203ENST00000579186 1945 ntBASIC13.57□□□□□ -0.24
C11orf88Q6PI97 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AC005622.1-201ENST00000636801 1703 ntBASIC13.57□□□□□ -0.24
C11orf88Q6PI97 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AC092053.3-201ENST00000641308 4975 ntBASIC13.57□□□□□ -0.24
C11orf88Q6PI97 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 HTR5BP-201ENST00000430851 1154 ntBASIC13.57□□□□□ -0.24
C11orf88Q6PI97 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 KRT18P2-201ENST00000447938 1258 ntBASIC13.57□□□□□ -0.24
C11orf88Q6PI97 DNAJB3-202ENST00000449667 1266 ntBASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AC087163.2-201ENST00000457299 853 ntBASIC13.57□□□□□ -0.24
C11orf88Q6PI97 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 AL513190.1-201ENST00000621254 727 ntBASIC13.57□□□□□ -0.24
C11orf88Q6PI97 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms