Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 METTL21AP1-201ENST00000438852 635 ntBASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 AC079140.1-201ENST00000508039 487 ntBASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 AC022145.2-201ENST00000598203 171 ntBASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 BEND3P1-201ENST00000421591 1944 ntBASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.87□□□□□ -0.03
PPP4R4Q6NUP7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AC004461.1-201ENST00000412461 403 ntBASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AC092474.2-201ENST00000424288 719 ntBASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 KRT18P32-201ENST00000424695 1287 ntBASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AC004449.1-201ENST00000564240 433 ntBASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AC105339.1-204ENST00000636249 355 ntBASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AC127383.1-201ENST00000444697 1800 ntBASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 AC117489.1-201ENST00000625169 3217 ntBASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPP4R4Q6NUP7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.85□□□□□ -0.03
PPP4R4Q6NUP7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms