Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
HS1BP3Q53T59 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HS1BP3Q53T59 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HS1BP3Q53T59 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 SBF1P1-201ENST00000444527 5631 ntBASIC17.29■□□□□ 0.36
HS1BP3Q53T59 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 PGAM5P1-201ENST00000518923 814 ntBASIC17.29■□□□□ 0.36
HS1BP3Q53T59 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 AC243562.2-201ENST00000561247 970 ntBASIC17.29■□□□□ 0.36
HS1BP3Q53T59 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 AC002347.1-201ENST00000569543 541 ntBASIC17.29■□□□□ 0.36
HS1BP3Q53T59 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 CES1P1-201ENST00000421606 1704 ntBASIC17.29■□□□□ 0.36
HS1BP3Q53T59 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 AC138969.3-201ENST00000546612 1459 ntBASIC17.29■□□□□ 0.36
HS1BP3Q53T59 AC138932.2-201ENST00000548268 1459 ntBASIC17.29■□□□□ 0.36
HS1BP3Q53T59 AC126755.4-201ENST00000549796 1459 ntBASIC17.29■□□□□ 0.36
HS1BP3Q53T59 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 AP000845.1-201ENST00000581677 2131 ntBASIC17.29■□□□□ 0.36
HS1BP3Q53T59 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HS1BP3Q53T59 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 RNU1-129P-201ENST00000384064 167 ntBASIC17.28■□□□□ 0.36
HS1BP3Q53T59 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 U1.21-201ENST00000580816 167 ntBASIC17.28■□□□□ 0.36
HS1BP3Q53T59 AC010327.4-202ENST00000591484 748 ntBASIC17.28■□□□□ 0.36
HS1BP3Q53T59 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 AP002414.3-201ENST00000589352 1468 ntBASIC17.28■□□□□ 0.36
HS1BP3Q53T59 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 BNIP3P1-202ENST00000550043 1585 ntBASIC17.28■□□□□ 0.36
HS1BP3Q53T59 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HS1BP3Q53T59 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.27■□□□□ 0.36
HS1BP3Q53T59 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms