Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 FAM45BP-202ENST00000592932 1624 ntBASIC14.91□□□□□ -0.02
HMGCS1Q01581 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 AL133267.1-201ENST00000398220 340 ntBASIC14.9□□□□□ -0.02
HMGCS1Q01581 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 GHSR-202ENST00000427970 912 ntBASIC14.9□□□□□ -0.02
HMGCS1Q01581 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 AC074044.1-201ENST00000609673 707 ntBASIC14.9□□□□□ -0.02
HMGCS1Q01581 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 AC093028.1-201ENST00000622998 982 ntBASIC14.9□□□□□ -0.02
HMGCS1Q01581 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGCS1Q01581 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCS1Q01581 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 AL121723.1-201ENST00000445194 1519 ntBASIC14.89□□□□□ -0.03
HMGCS1Q01581 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 KLF2P3-201ENST00000451977 1087 ntBASIC14.89□□□□□ -0.03
HMGCS1Q01581 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 AC069120.2-201ENST00000524091 540 ntBASIC14.89□□□□□ -0.03
HMGCS1Q01581 AC027369.6-201ENST00000525520 931 ntBASIC14.89□□□□□ -0.03
HMGCS1Q01581 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 AC025181.2-201ENST00000606994 802 ntBASIC14.89□□□□□ -0.03
HMGCS1Q01581 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms