Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
EPHA4P54764 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 AC006001.1-201ENST00000325130 474 ntBASIC14.83□□□□□ -0.04
EPHA4P54764 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.83□□□□□ -0.04
EPHA4P54764 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.83□□□□□ -0.04
EPHA4P54764 CD8B2-202ENST00000417670 633 ntBASIC14.83□□□□□ -0.04
EPHA4P54764 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.83□□□□□ -0.04
EPHA4P54764 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.83□□□□□ -0.04
EPHA4P54764 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.83□□□□□ -0.04
EPHA4P54764 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC14.83□□□□□ -0.04
EPHA4P54764 DUX4L45-201ENST00000566406 1057 ntBASIC14.83□□□□□ -0.04
EPHA4P54764 SAMD11P1-201ENST00000571429 661 ntBASIC14.83□□□□□ -0.04
EPHA4P54764 RN7SL48P-201ENST00000579283 293 ntBASIC14.83□□□□□ -0.04
EPHA4P54764 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.83□□□□□ -0.04
EPHA4P54764 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.83□□□□□ -0.04
EPHA4P54764 AL603764.1-201ENST00000636452 321 ntBASIC14.83□□□□□ -0.04
EPHA4P54764 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.83□□□□□ -0.04
EPHA4P54764 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
EPHA4P54764 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 AL365203.3-201ENST00000609742 2057 ntBASIC14.83□□□□□ -0.04
EPHA4P54764 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
EPHA4P54764 AC132872.4-202ENST00000622924 2756 ntBASIC14.83□□□□□ -0.04
EPHA4P54764 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
EPHA4P54764 KRT8P14-201ENST00000414254 1442 ntBASIC14.83□□□□□ -0.04
EPHA4P54764 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
EPHA4P54764 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
EPHA4P54764 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.82□□□□□ -0.04
EPHA4P54764 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
EPHA4P54764 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
EPHA4P54764 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
EPHA4P54764 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.82□□□□□ -0.04
EPHA4P54764 AC026954.1-201ENST00000429771 1293 ntBASIC14.82□□□□□ -0.04
EPHA4P54764 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.82□□□□□ -0.04
EPHA4P54764 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.82□□□□□ -0.04
EPHA4P54764 RNA5SP486-201ENST00000515961 83 ntBASIC14.82□□□□□ -0.04
EPHA4P54764 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.82□□□□□ -0.04
EPHA4P54764 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.82□□□□□ -0.04
EPHA4P54764 AC138951.2-201ENST00000623455 1161 ntBASIC14.82□□□□□ -0.04
EPHA4P54764 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
EPHA4P54764 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.82□□□□□ -0.04
EPHA4P54764 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.82□□□□□ -0.04
EPHA4P54764 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
EPHA4P54764 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
EPHA4P54764 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
EPHA4P54764 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.82□□□□□ -0.04
EPHA4P54764 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA4P54764 LRRC59-203ENST00000576448 1531 ntBASIC14.82□□□□□ -0.04
EPHA4P54764 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.81□□□□□ -0.04
EPHA4P54764 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.81□□□□□ -0.04
EPHA4P54764 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.81□□□□□ -0.04
EPHA4P54764 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.81□□□□□ -0.04
EPHA4P54764 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.81□□□□□ -0.04
EPHA4P54764 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.81□□□□□ -0.04
EPHA4P54764 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA4P54764 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms