Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PMS1P54277 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PMS1P54277 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
PMS1P54277 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PMS1P54277 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PMS1P54277 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.96■□□□□ 0.31
PMS1P54277 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.96■□□□□ 0.31
PMS1P54277 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.96■□□□□ 0.31
PMS1P54277 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.96■□□□□ 0.31
PMS1P54277 AC093512.1-201ENST00000617969 520 ntBASIC16.96■□□□□ 0.31
PMS1P54277 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.96■□□□□ 0.31
PMS1P54277 AC012508.2-201ENST00000567613 1472 ntBASIC16.96■□□□□ 0.31
PMS1P54277 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PMS1P54277 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PMS1P54277 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.96■□□□□ 0.31
PMS1P54277 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PMS1P54277 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.96■□□□□ 0.3
PMS1P54277 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PMS1P54277 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PMS1P54277 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PMS1P54277 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PMS1P54277 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PMS1P54277 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PMS1P54277 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.95■□□□□ 0.3
PMS1P54277 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.95■□□□□ 0.3
PMS1P54277 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.95■□□□□ 0.3
PMS1P54277 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.95■□□□□ 0.3
PMS1P54277 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 MRPS18AP1-201ENST00000414458 589 ntBASIC16.95■□□□□ 0.3
PMS1P54277 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.95■□□□□ 0.3
PMS1P54277 GAPDHP40-201ENST00000505218 1006 ntBASIC16.95■□□□□ 0.3
PMS1P54277 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.95■□□□□ 0.3
PMS1P54277 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.95■□□□□ 0.3
PMS1P54277 TIMM17BP1-201ENST00000545713 516 ntBASIC16.95■□□□□ 0.3
PMS1P54277 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.95■□□□□ 0.3
PMS1P54277 SRD5A3P1-201ENST00000603021 949 ntBASIC16.95■□□□□ 0.3
PMS1P54277 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.95■□□□□ 0.3
PMS1P54277 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PMS1P54277 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PMS1P54277 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.95■□□□□ 0.3
PMS1P54277 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
PMS1P54277 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PMS1P54277 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 AL157414.3-201ENST00000624276 1954 ntBASIC16.95■□□□□ 0.3
PMS1P54277 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMS1P54277 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.95■□□□□ 0.3
PMS1P54277 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PMS1P54277 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.94■□□□□ 0.3
PMS1P54277 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PMS1P54277 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.94■□□□□ 0.3
PMS1P54277 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PMS1P54277 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PMS1P54277 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.94■□□□□ 0.3
PMS1P54277 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 MEIS3P1-201ENST00000495167 958 ntBASIC16.94■□□□□ 0.3
PMS1P54277 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.94■□□□□ 0.3
PMS1P54277 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PMS1P54277 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PMS1P54277 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PMS1P54277 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
PMS1P54277 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PMS1P54277 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms