Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.86■□□□□ 0.13
ITGA8P53708 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.86■□□□□ 0.13
ITGA8P53708 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
ITGA8P53708 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.86■□□□□ 0.13
ITGA8P53708 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ITGA8P53708 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.86■□□□□ 0.13
ITGA8P53708 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.86■□□□□ 0.13
ITGA8P53708 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.86■□□□□ 0.13
ITGA8P53708 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
ITGA8P53708 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.86■□□□□ 0.13
ITGA8P53708 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.86■□□□□ 0.13
ITGA8P53708 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.86■□□□□ 0.13
ITGA8P53708 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.86■□□□□ 0.13
ITGA8P53708 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.86■□□□□ 0.13
ITGA8P53708 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.86■□□□□ 0.13
ITGA8P53708 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
ITGA8P53708 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.86■□□□□ 0.13
ITGA8P53708 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.86■□□□□ 0.13
ITGA8P53708 AC015910.1-201ENST00000579400 975 ntBASIC15.86■□□□□ 0.13
ITGA8P53708 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.86■□□□□ 0.13
ITGA8P53708 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
ITGA8P53708 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.86■□□□□ 0.13
ITGA8P53708 RN7SL828P-201ENST00000607615 303 ntBASIC15.86■□□□□ 0.13
ITGA8P53708 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
ITGA8P53708 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.86■□□□□ 0.13
ITGA8P53708 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.86■□□□□ 0.13
ITGA8P53708 AC105339.1-204ENST00000636249 355 ntBASIC15.86■□□□□ 0.13
ITGA8P53708 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ITGA8P53708 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 REXO1L4P-201ENST00000605109 1937 ntBASIC15.86■□□□□ 0.13
ITGA8P53708 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.86■□□□□ 0.13
ITGA8P53708 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ITGA8P53708 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.86■□□□□ 0.13
ITGA8P53708 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
ITGA8P53708 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ITGA8P53708 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ITGA8P53708 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
ITGA8P53708 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 MIR1233-2-201ENST00000408138 82 ntBASIC15.85■□□□□ 0.13
ITGA8P53708 MIR1233-1-201ENST00000408722 82 ntBASIC15.85■□□□□ 0.13
ITGA8P53708 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 KRT18P32-201ENST00000424695 1287 ntBASIC15.85■□□□□ 0.13
ITGA8P53708 AC004832.2-201ENST00000426397 482 ntBASIC15.85■□□□□ 0.13
ITGA8P53708 KRT18P64-201ENST00000434946 1219 ntBASIC15.85■□□□□ 0.13
ITGA8P53708 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.85■□□□□ 0.13
ITGA8P53708 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.85■□□□□ 0.13
ITGA8P53708 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.85■□□□□ 0.13
ITGA8P53708 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
ITGA8P53708 SLED1-202ENST00000512051 380 ntBASIC15.85■□□□□ 0.13
ITGA8P53708 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ITGA8P53708 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.85■□□□□ 0.13
ITGA8P53708 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.85■□□□□ 0.13
ITGA8P53708 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.85■□□□□ 0.13
ITGA8P53708 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.85■□□□□ 0.13
ITGA8P53708 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.85■□□□□ 0.13
ITGA8P53708 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
ITGA8P53708 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.85■□□□□ 0.13
ITGA8P53708 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.85■□□□□ 0.13
ITGA8P53708 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.85■□□□□ 0.13
ITGA8P53708 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.85■□□□□ 0.13
ITGA8P53708 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ITGA8P53708 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITGA8P53708 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITGA8P53708 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITGA8P53708 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ITGA8P53708 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITGA8P53708 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.84■□□□□ 0.13
ITGA8P53708 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ITGA8P53708 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITGA8P53708 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ITGA8P53708 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITGA8P53708 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms