Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.99□□□□□ -0.01
PDX1P52945 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.99□□□□□ -0.01
PDX1P52945 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
PDX1P52945 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.99□□□□□ -0.01
PDX1P52945 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.99□□□□□ -0.01
PDX1P52945 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.99□□□□□ -0.01
PDX1P52945 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PDX1P52945 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
PDX1P52945 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PDX1P52945 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PDX1P52945 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
PDX1P52945 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PDX1P52945 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PDX1P52945 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PDX1P52945 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.98□□□□□ -0.01
PDX1P52945 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.98□□□□□ -0.01
PDX1P52945 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.98□□□□□ -0.01
PDX1P52945 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 AC079316.1-201ENST00000548397 411 ntBASIC14.98□□□□□ -0.01
PDX1P52945 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.98□□□□□ -0.01
PDX1P52945 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.98□□□□□ -0.01
PDX1P52945 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.98□□□□□ -0.01
PDX1P52945 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PDX1P52945 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDX1P52945 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.98□□□□□ -0.01
PDX1P52945 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PDX1P52945 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.97□□□□□ -0.01
PDX1P52945 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
PDX1P52945 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PDX1P52945 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.97□□□□□ -0.01
PDX1P52945 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.97□□□□□ -0.01
PDX1P52945 CNN2P8-201ENST00000421872 913 ntBASIC14.97□□□□□ -0.01
PDX1P52945 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 FAM86HP-204ENST00000513466 959 ntBASIC14.97□□□□□ -0.01
PDX1P52945 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.97□□□□□ -0.01
PDX1P52945 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.97□□□□□ -0.01
PDX1P52945 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.97□□□□□ -0.01
PDX1P52945 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.97□□□□□ -0.01
PDX1P52945 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.97□□□□□ -0.01
PDX1P52945 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.97□□□□□ -0.01
PDX1P52945 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.97□□□□□ -0.01
PDX1P52945 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.97□□□□□ -0.01
PDX1P52945 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 HYMAI-201ENST00000635591 3347 ntBASIC14.97□□□□□ -0.01
PDX1P52945 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PDX1P52945 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.97□□□□□ -0.01
PDX1P52945 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.97□□□□□ -0.01
PDX1P52945 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDX1P52945 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDX1P52945 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms