Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 AKAP8P1-201ENST00000434743 1349 ntBASIC10.48□□□□□ -0.73
CXCL5P42830 BSG-215ENST00000618006 1329 ntTSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.48□□□□□ -0.73
CXCL5P42830 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 AC006504.5-208ENST00000588784 2401 ntBASIC10.47□□□□□ -0.73
CXCL5P42830 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 FAM220BP-201ENST00000377689 816 ntBASIC10.47□□□□□ -0.73
CXCL5P42830 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 AL031284.1-201ENST00000419297 478 ntBASIC10.47□□□□□ -0.73
CXCL5P42830 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.47□□□□□ -0.73
CXCL5P42830 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.47□□□□□ -0.73
CXCL5P42830 PPIE-208ENST00000470213 927 ntTSL 3 BASIC10.47□□□□□ -0.73
CXCL5P42830 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 AC011467.4-201ENST00000594891 528 ntBASIC10.47□□□□□ -0.73
CXCL5P42830 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 AC025580.3-201ENST00000617932 1424 ntBASIC10.47□□□□□ -0.73
CXCL5P42830 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 LINC00552-201ENST00000625151 2579 ntBASIC10.47□□□□□ -0.73
CXCL5P42830 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 CES1P1-201ENST00000421606 1704 ntBASIC10.47□□□□□ -0.73
CXCL5P42830 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC10.47□□□□□ -0.73
CXCL5P42830 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.47□□□□□ -0.73
CXCL5P42830 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms