Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40LGP29965 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.74□□□□□ -0.21
CD40LGP29965 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CD40LGP29965 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40LGP29965 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40LGP29965 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.74□□□□□ -0.21
CD40LGP29965 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.74□□□□□ -0.21
CD40LGP29965 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.74□□□□□ -0.21
CD40LGP29965 ABCD1P5-201ENST00000445663 754 ntBASIC13.74□□□□□ -0.21
CD40LGP29965 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40LGP29965 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.74□□□□□ -0.21
CD40LGP29965 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40LGP29965 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 AC011467.4-201ENST00000594891 528 ntBASIC13.74□□□□□ -0.21
CD40LGP29965 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 AP000867.4-201ENST00000641616 219 ntBASIC13.74□□□□□ -0.21
CD40LGP29965 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.74□□□□□ -0.21
CD40LGP29965 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40LGP29965 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.74□□□□□ -0.21
CD40LGP29965 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40LGP29965 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CD40LGP29965 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.74□□□□□ -0.21
CD40LGP29965 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CD40LGP29965 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CD40LGP29965 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.73□□□□□ -0.21
CD40LGP29965 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40LGP29965 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.73□□□□□ -0.21
CD40LGP29965 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CD40LGP29965 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CD40LGP29965 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CD40LGP29965 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40LGP29965 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
CD40LGP29965 RBM17P3-201ENST00000417687 1192 ntBASIC13.73□□□□□ -0.21
CD40LGP29965 TSPY19P-201ENST00000418461 509 ntBASIC13.73□□□□□ -0.21
CD40LGP29965 TSPY18P-201ENST00000441642 509 ntBASIC13.73□□□□□ -0.21
CD40LGP29965 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40LGP29965 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.73□□□□□ -0.21
CD40LGP29965 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.73□□□□□ -0.21
CD40LGP29965 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CD40LGP29965 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CD40LGP29965 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.73□□□□□ -0.21
CD40LGP29965 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 CICP11-201ENST00000434745 2827 ntBASIC13.73□□□□□ -0.21
CD40LGP29965 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 AC018892.3-201ENST00000623986 2499 ntBASIC13.73□□□□□ -0.21
CD40LGP29965 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CD40LGP29965 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
CD40LGP29965 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40LGP29965 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CD40LGP29965 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.73□□□□□ -0.21
CD40LGP29965 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CD40LGP29965 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40LGP29965 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.72□□□□□ -0.21
CD40LGP29965 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms