Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN3P26045 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PTPN3P26045 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN3P26045 RN7SL399P-201ENST00000471648 279 ntBASIC15.72■□□□□ 0.11
PTPN3P26045 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN3P26045 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.72■□□□□ 0.11
PTPN3P26045 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN3P26045 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.72■□□□□ 0.11
PTPN3P26045 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PTPN3P26045 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN3P26045 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN3P26045 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN3P26045 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN3P26045 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN3P26045 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.72■□□□□ 0.11
PTPN3P26045 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN3P26045 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTPN3P26045 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN3P26045 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN3P26045 AC067930.6-201ENST00000623257 4947 ntBASIC15.72■□□□□ 0.11
PTPN3P26045 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN3P26045 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN3P26045 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PTPN3P26045 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PTPN3P26045 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN3P26045 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN3P26045 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN3P26045 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTPN3P26045 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN3P26045 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PTPN3P26045 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.71■□□□□ 0.11
PTPN3P26045 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.71■□□□□ 0.11
PTPN3P26045 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.71■□□□□ 0.11
PTPN3P26045 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PTPN3P26045 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.71■□□□□ 0.11
PTPN3P26045 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.71■□□□□ 0.11
PTPN3P26045 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.71■□□□□ 0.11
PTPN3P26045 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.71■□□□□ 0.11
PTPN3P26045 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.71■□□□□ 0.11
PTPN3P26045 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.71■□□□□ 0.11
PTPN3P26045 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.71■□□□□ 0.11
PTPN3P26045 SAMD11P1-201ENST00000571429 661 ntBASIC15.71■□□□□ 0.11
PTPN3P26045 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.71■□□□□ 0.11
PTPN3P26045 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.71■□□□□ 0.11
PTPN3P26045 AL662799.1-202ENST00000614205 422 ntBASIC15.71■□□□□ 0.11
PTPN3P26045 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.71■□□□□ 0.11
PTPN3P26045 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PTPN3P26045 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.71■□□□□ 0.11
PTPN3P26045 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PTPN3P26045 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN3P26045 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN3P26045 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.71■□□□□ 0.1
PTPN3P26045 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN3P26045 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN3P26045 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
PTPN3P26045 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.71■□□□□ 0.1
PTPN3P26045 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN3P26045 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN3P26045 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN3P26045 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN3P26045 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN3P26045 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PTPN3P26045 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN3P26045 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PTPN3P26045 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN3P26045 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
PTPN3P26045 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN3P26045 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN3P26045 DRD5P1-201ENST00000456605 1438 ntBASIC15.7■□□□□ 0.1
PTPN3P26045 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PTPN3P26045 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.7■□□□□ 0.1
PTPN3P26045 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PTPN3P26045 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN3P26045 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN3P26045 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
PTPN3P26045 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN3P26045 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN3P26045 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN3P26045 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN3P26045 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN3P26045 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PTPN3P26045 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PTPN3P26045 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN3P26045 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms